Cluster: HRGMv2_0621_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0621
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0621_5 | HRGMv2_0621_5_115 | 121542 | 122483 | - | 2.A.6.4.1 |
| TC | HRGMv2_0621_5 | HRGMv2_0621_5_116 | 122517 | 124385 | - | 2.A.6.4.1 |
| TC | HRGMv2_0621_5 | HRGMv2_0621_5_117 | 124448 | 124774 | - | 3.A.5.1.1 |
| pfam | HRGMv2_0621_5 | HRGMv2_0621_5_118 | 124958 | 126085 | - | TGT |
| pfam | HRGMv2_0621_5 | HRGMv2_0621_5_119 | 126105 | 127136 | - | Queuosine_synth |
| CAZyme | HRGMv2_0621_5 | HRGMv2_0621_5_120 | 127212 | 128840 | - | GH77 |
Gene ID: HRGMv2_0621_5_115
Type: TC
Location: 121542 - 122483 (-)
Type: TC
Location: 121542 - 122483 (-)
Gene ID: HRGMv2_0621_5_116
Type: TC
Location: 122517 - 124385 (-)
Type: TC
Location: 122517 - 124385 (-)
Gene ID: HRGMv2_0621_5_117
Type: TC
Location: 124448 - 124774 (-)
Type: TC
Location: 124448 - 124774 (-)
Gene ID: HRGMv2_0621_5_118
Type: pfam
Location: 124958 - 126085 (-)
Type: pfam
Location: 124958 - 126085 (-)
Gene ID: HRGMv2_0621_5_119
Type: pfam
Location: 126105 - 127136 (-)
Type: pfam
Location: 126105 - 127136 (-)
Gene ID: HRGMv2_0621_5_120
Type: CAZyme
Location: 127212 - 128840 (-)
Type: CAZyme
Location: 127212 - 128840 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Species
Oxalobacter aliiformigenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0621_5_118 | vegetarian > vegan | 2.09324 | 0.04112 |