Cluster: HRGMv2_0621_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0621
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0621_1 | HRGMv2_0621_1_142 | 164621 | 166006 | - | 9.B.145.1.2 |
| NULL(UNKNOWN) | HRGMv2_0621_1 | HRGMv2_0621_1_143 | 166147 | 167085 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0621_1 | HRGMv2_0621_1_144 | 167438 | 168850 | + | 1.I.1.1.3 |
| pfam | HRGMv2_0621_1 | HRGMv2_0621_1_145 | 168892 | 172353 | + | tRNA_anti-codon | PHP | DNA_pol3_alpha | HHH_6 | DNA_pol3_finger |
| CAZyme | HRGMv2_0621_1 | HRGMv2_0621_1_146 | 172482 | 173609 | + | GT9 |
| CAZyme | HRGMv2_0621_1 | HRGMv2_0621_1_147 | 173606 | 174370 | + | GT2 |
| CAZyme | HRGMv2_0621_1 | HRGMv2_0621_1_148 | 174367 | 175428 | + | GT4 |
Gene ID: HRGMv2_0621_1_142
Type: TC
Location: 164621 - 166006 (-)
Type: TC
Location: 164621 - 166006 (-)
Gene ID: HRGMv2_0621_1_143
Type:
Location: 166147 - 167085 (-)
Type:
Location: 166147 - 167085 (-)
Gene ID: HRGMv2_0621_1_144
Type: TC
Location: 167438 - 168850 (+)
Type: TC
Location: 167438 - 168850 (+)
Gene ID: HRGMv2_0621_1_145
Type: pfam
Location: 168892 - 172353 (+)
Type: pfam
Location: 168892 - 172353 (+)
Gene ID: HRGMv2_0621_1_146
Type: CAZyme
Location: 172482 - 173609 (+)
Type: CAZyme
Location: 172482 - 173609 (+)
Gene ID: HRGMv2_0621_1_147
Type: CAZyme
Location: 173606 - 174370 (+)
Type: CAZyme
Location: 173606 - 174370 (+)
Gene ID: HRGMv2_0621_1_148
Type: CAZyme
Location: 174367 - 175428 (+)
Type: CAZyme
Location: 174367 - 175428 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Species
Oxalobacter aliiformigenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.