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Cluster: HRGMv2_0620_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0620_31 HRGMv2_0620_31_22 21029 21967 + GT9
CAZyme HRGMv2_0620_31 HRGMv2_0620_31_23 22063 23229 - GT4
pfam HRGMv2_0620_31 HRGMv2_0620_31_24 23383 24591 + Wzy_C
CAZyme HRGMv2_0620_31 HRGMv2_0620_31_25 24600 25379 + GT25
CAZyme HRGMv2_0620_31 HRGMv2_0620_31_26 25372 26568 - GT4
TC HRGMv2_0620_31 HRGMv2_0620_31_27 26587 28587 - 9.B.97.5.1
CAZyme HRGMv2_0620_31 HRGMv2_0620_31_28 28673 29857 + GT4
Gene ID: HRGMv2_0620_31_22
Type: CAZyme
Location: 21029 - 21967 (+)
Gene ID: HRGMv2_0620_31_23
Type: CAZyme
Location: 22063 - 23229 (-)
Gene ID: HRGMv2_0620_31_24
Type: pfam
Location: 23383 - 24591 (+)
Gene ID: HRGMv2_0620_31_25
Type: CAZyme
Location: 24600 - 25379 (+)
Gene ID: HRGMv2_0620_31_26
Type: CAZyme
Location: 25372 - 26568 (-)
Gene ID: HRGMv2_0620_31_27
Type: TC
Location: 26587 - 28587 (-)
Gene ID: HRGMv2_0620_31_28
Type: CAZyme
Location: 28673 - 29857 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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