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Cluster: HRGMv2_0620_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0620_10 HRGMv2_0620_10_5 6276 7349 - GH8
TC HRGMv2_0620_10 HRGMv2_0620_10_6 7346 9523 - 4.D.3.1.6
CAZyme HRGMv2_0620_10 HRGMv2_0620_10_7 9588 12170 - GT2
NULL(UNKNOWN) HRGMv2_0620_10 HRGMv2_0620_10_8 12284 12490 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0620_10 HRGMv2_0620_10_9 12596 12976 - HIT | DcpS_C
TC HRGMv2_0620_10 HRGMv2_0620_10_10 13014 14321 - 2.A.25.1.4
TC HRGMv2_0620_10 HRGMv2_0620_10_11 14633 15388 - 3.A.1.14.7
TC HRGMv2_0620_10 HRGMv2_0620_10_12 15385 16422 - 3.A.1.14.16
Gene ID: HRGMv2_0620_10_5
Type: CAZyme
Location: 6276 - 7349 (-)
Gene ID: HRGMv2_0620_10_6
Type: TC
Location: 7346 - 9523 (-)
Gene ID: HRGMv2_0620_10_7
Type: CAZyme
Location: 9588 - 12170 (-)
Gene ID: HRGMv2_0620_10_8
Type:
Location: 12284 - 12490 (+)
Gene ID: HRGMv2_0620_10_9
Type: pfam
Location: 12596 - 12976 (-)
Gene ID: HRGMv2_0620_10_10
Type: TC
Location: 13014 - 14321 (-)
Gene ID: HRGMv2_0620_10_11
Type: TC
Location: 14633 - 15388 (-)
Gene ID: HRGMv2_0620_10_12
Type: TC
Location: 15385 - 16422 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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