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Cluster: HRGMv2_0620_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0620_7 HRGMv2_0620_7_34 17808 19493 - 2.A.81.1.2
pfam HRGMv2_0620_7 HRGMv2_0620_7_35 19620 20897 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
pfam HRGMv2_0620_7 HRGMv2_0620_7_36 20915 21064 - LptM_cons
TC HRGMv2_0620_7 HRGMv2_0620_7_37 21092 21403 + 9.B.21.2.1
CAZyme HRGMv2_0620_7 HRGMv2_0620_7_38 21425 23788 - GT51
pfam HRGMv2_0620_7 HRGMv2_0620_7_39 24099 24566 + Acyl-ACP_TE | 4HBT | 4HBT_2
TC HRGMv2_0620_7 HRGMv2_0620_7_40 24652 25452 + 3.A.1.27.3
TC HRGMv2_0620_7 HRGMv2_0620_7_41 25449 26225 + 3.A.1.27.3
Gene ID: HRGMv2_0620_7_34
Type: TC
Location: 17808 - 19493 (-)
Gene ID: HRGMv2_0620_7_35
Type: pfam
Location: 19620 - 20897 (-)
Gene ID: HRGMv2_0620_7_36
Type: pfam
Location: 20915 - 21064 (-)
Gene ID: HRGMv2_0620_7_37
Type: TC
Location: 21092 - 21403 (+)
Gene ID: HRGMv2_0620_7_38
Type: CAZyme
Location: 21425 - 23788 (-)
Gene ID: HRGMv2_0620_7_39
Type: pfam
Location: 24099 - 24566 (+)
Gene ID: HRGMv2_0620_7_40
Type: TC
Location: 24652 - 25452 (+)
Gene ID: HRGMv2_0620_7_41
Type: TC
Location: 25449 - 26225 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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