Cluster: HRGMv2_0612_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0612
- CGC Family ID: CGCFAM_09736
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0612_54 | HRGMv2_0612_54_31 | 30640 | 38283 | + | GH94 | GT84 |
| pfam | HRGMv2_0612_54 | HRGMv2_0612_54_32 | 38396 | 39571 | + | Glyco_hydro_36 |
| TC | HRGMv2_0612_54 | HRGMv2_0612_54_33 | 39816 | 40748 | + | 2.A.98.1.4 |
Gene ID: HRGMv2_0612_54_31
Type: CAZyme
Location: 30640 - 38283 (+)
Type: CAZyme
Location: 30640 - 38283 (+)
Gene ID: HRGMv2_0612_54_32
Type: pfam
Location: 38396 - 39571 (+)
Type: pfam
Location: 38396 - 39571 (+)
Gene ID: HRGMv2_0612_54_33
Type: TC
Location: 39816 - 40748 (+)
Type: TC
Location: 39816 - 40748 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Species
Oxalobacter formigenes_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.