Cluster: HRGMv2_0612_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0612
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0612_37 | HRGMv2_0612_37_71 | 76367 | 77302 | + | CE11 |
| pfam | HRGMv2_0612_37 | HRGMv2_0612_37_72 | 77319 | 77786 | - | DciA |
| TC | HRGMv2_0612_37 | HRGMv2_0612_37_73 | 78087 | 80843 | + | 3.A.5.1.1 |
Gene ID: HRGMv2_0612_37_71
Type: CAZyme
Location: 76367 - 77302 (+)
Type: CAZyme
Location: 76367 - 77302 (+)
Gene ID: HRGMv2_0612_37_72
Type: pfam
Location: 77319 - 77786 (-)
Type: pfam
Location: 77319 - 77786 (-)
Gene ID: HRGMv2_0612_37_73
Type: TC
Location: 78087 - 80843 (+)
Type: TC
Location: 78087 - 80843 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Species
Oxalobacter formigenes_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.