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Cluster: HRGMv2_0612_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0612_87 HRGMv2_0612_87_13 10134 11246 + 1.A.35.3.2
NULL(UNKNOWN) HRGMv2_0612_87 HRGMv2_0612_87_14 11490 11906 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0612_87 HRGMv2_0612_87_15 12300 13472 + 2.A.1.2.14
TC HRGMv2_0612_87 HRGMv2_0612_87_16 13642 14823 + 2.A.1.2.14
pfam HRGMv2_0612_87 HRGMv2_0612_87_17 14910 15509 - SNase
pfam HRGMv2_0612_87 HRGMv2_0612_87_18 15785 16603 + Trehalose_PPase
CAZyme HRGMv2_0612_87 HRGMv2_0612_87_19 16600 18387 + GH15
TC HRGMv2_0612_87 HRGMv2_0612_87_20 18463 19446 + 8.A.5.1.4
TC HRGMv2_0612_87 HRGMv2_0612_87_21 19678 20043 + 8.A.5.1.4
pfam HRGMv2_0612_87 HRGMv2_0612_87_22 20106 20648 + Aldo_ket_red
TC HRGMv2_0612_87 HRGMv2_0612_87_23 20781 21095 - 2.A.7.1.10
Gene ID: HRGMv2_0612_87_13
Type: TC
Location: 10134 - 11246 (+)
Gene ID: HRGMv2_0612_87_14
Type:
Location: 11490 - 11906 (-)
Gene ID: HRGMv2_0612_87_15
Type: TC
Location: 12300 - 13472 (+)
Gene ID: HRGMv2_0612_87_16
Type: TC
Location: 13642 - 14823 (+)
Gene ID: HRGMv2_0612_87_17
Type: pfam
Location: 14910 - 15509 (-)
Gene ID: HRGMv2_0612_87_18
Type: pfam
Location: 15785 - 16603 (+)
Gene ID: HRGMv2_0612_87_19
Type: CAZyme
Location: 16600 - 18387 (+)
Gene ID: HRGMv2_0612_87_20
Type: TC
Location: 18463 - 19446 (+)
Gene ID: HRGMv2_0612_87_21
Type: TC
Location: 19678 - 20043 (+)
Gene ID: HRGMv2_0612_87_22
Type: pfam
Location: 20106 - 20648 (+)
Gene ID: HRGMv2_0612_87_23
Type: TC
Location: 20781 - 21095 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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