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Cluster: HRGMv2_0612_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0612_10 HRGMv2_0612_10_32 35155 36375 - 2.A.1.2.7
pfam HRGMv2_0612_10 HRGMv2_0612_10_33 36628 37047 - 4HBT | 4HBT_2 | Acyl-ACP_TE_C
sulfatase HRGMv2_0612_10 HRGMv2_0612_10_34 37164 38843 + S1_6
CAZyme HRGMv2_0612_10 HRGMv2_0612_10_35 38991 40622 + CBM48 | GH13_9
pfam HRGMv2_0612_10 HRGMv2_0612_10_36 40656 41165 + Alpha-amylase_C
CAZyme HRGMv2_0612_10 HRGMv2_0612_10_37 41171 43207 + CBM48 | GH13_11
pfam HRGMv2_0612_10 HRGMv2_0612_10_38 43306 44931 + PGM_PMM_I | PGM_PMM_II | PGM_PMM_III | PGM1_C_vert_fung
pfam HRGMv2_0612_10 HRGMv2_0612_10_39 45045 46346 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_0612_10 HRGMv2_0612_10_40 46379 47839 + GT5
CAZyme HRGMv2_0612_10 HRGMv2_0612_10_41 48057 50513 + GT35
Gene ID: HRGMv2_0612_10_32
Type: TC
Location: 35155 - 36375 (-)
Gene ID: HRGMv2_0612_10_33
Type: pfam
Location: 36628 - 37047 (-)
Gene ID: HRGMv2_0612_10_34
Type: sulfatase
Location: 37164 - 38843 (+)
Gene ID: HRGMv2_0612_10_35
Type: CAZyme
Location: 38991 - 40622 (+)
Gene ID: HRGMv2_0612_10_36
Type: pfam
Location: 40656 - 41165 (+)
Gene ID: HRGMv2_0612_10_37
Type: CAZyme
Location: 41171 - 43207 (+)
Gene ID: HRGMv2_0612_10_38
Type: pfam
Location: 43306 - 44931 (+)
Gene ID: HRGMv2_0612_10_39
Type: pfam
Location: 45045 - 46346 (+)
Gene ID: HRGMv2_0612_10_40
Type: CAZyme
Location: 46379 - 47839 (+)
Gene ID: HRGMv2_0612_10_41
Type: CAZyme
Location: 48057 - 50513 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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