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Cluster: HRGMv2_0609_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0609_5 HRGMv2_0609_5_153 160952 161830 - 2.A.7.3.52
TC HRGMv2_0609_5 HRGMv2_0609_5_154 161954 162709 - 3.A.1.3.26
TC HRGMv2_0609_5 HRGMv2_0609_5_155 162706 163488 - 3.A.1.3.2
TC HRGMv2_0609_5 HRGMv2_0609_5_156 163594 164364 - 3.A.1.3.28
TC HRGMv2_0609_5 HRGMv2_0609_5_157 164636 165394 - 2.A.102.3.2
TC HRGMv2_0609_5 HRGMv2_0609_5_158 165820 166857 + 1.A.11.1.4
pfam HRGMv2_0609_5 HRGMv2_0609_5_159 166823 167050 + Ammonium_transp
NULL(UNKNOWN) HRGMv2_0609_5 HRGMv2_0609_5_160 167119 167436 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0609_5 HRGMv2_0609_5_161 167465 169210 - AA3_2
TC HRGMv2_0609_5 HRGMv2_0609_5_162 169419 170549 + 3.A.1.27.1
TC HRGMv2_0609_5 HRGMv2_0609_5_163 170553 171365 + 3.A.1.27.1
Gene ID: HRGMv2_0609_5_153
Type: TC
Location: 160952 - 161830 (-)
Gene ID: HRGMv2_0609_5_154
Type: TC
Location: 161954 - 162709 (-)
Gene ID: HRGMv2_0609_5_155
Type: TC
Location: 162706 - 163488 (-)
Gene ID: HRGMv2_0609_5_156
Type: TC
Location: 163594 - 164364 (-)
Gene ID: HRGMv2_0609_5_157
Type: TC
Location: 164636 - 165394 (-)
Gene ID: HRGMv2_0609_5_158
Type: TC
Location: 165820 - 166857 (+)
Gene ID: HRGMv2_0609_5_159
Type: pfam
Location: 166823 - 167050 (+)
Gene ID: HRGMv2_0609_5_160
Type:
Location: 167119 - 167436 (+)
Gene ID: HRGMv2_0609_5_161
Type: CAZyme
Location: 167465 - 169210 (-)
Gene ID: HRGMv2_0609_5_162
Type: TC
Location: 169419 - 170549 (+)
Gene ID: HRGMv2_0609_5_163
Type: TC
Location: 170553 - 171365 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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