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Cluster: HRGMv2_0609_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0609_33 HRGMv2_0609_33_7 7143 7874 - 3.A.1.4.10
TC HRGMv2_0609_33 HRGMv2_0609_33_8 7871 8725 - 3.A.1.4.10
TC HRGMv2_0609_33 HRGMv2_0609_33_9 8722 9813 - 3.A.1.4.8
TC HRGMv2_0609_33 HRGMv2_0609_33_10 9810 10739 - 3.A.1.4.8
TC HRGMv2_0609_33 HRGMv2_0609_33_11 10863 12023 - 3.A.1.4.3
pfam HRGMv2_0609_33 HRGMv2_0609_33_12 12096 15932 - Aldedh | Pro_dh | Pro_dh-DNA_bdg | PRODH | PutA_1st
pfam HRGMv2_0609_33 HRGMv2_0609_33_13 16266 16820 - EFP | EFP_N | Elong-fact-P_C
CAZyme HRGMv2_0609_33 HRGMv2_0609_33_14 16979 18061 - GT104
pfam HRGMv2_0609_33 HRGMv2_0609_33_15 18263 20206 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_5 | UvrC_RNaseH
TC HRGMv2_0609_33 HRGMv2_0609_33_16 20270 20836 + 4.F.1.1.8
Gene ID: HRGMv2_0609_33_7
Type: TC
Location: 7143 - 7874 (-)
Gene ID: HRGMv2_0609_33_8
Type: TC
Location: 7871 - 8725 (-)
Gene ID: HRGMv2_0609_33_9
Type: TC
Location: 8722 - 9813 (-)
Gene ID: HRGMv2_0609_33_10
Type: TC
Location: 9810 - 10739 (-)
Gene ID: HRGMv2_0609_33_11
Type: TC
Location: 10863 - 12023 (-)
Gene ID: HRGMv2_0609_33_12
Type: pfam
Location: 12096 - 15932 (-)
Gene ID: HRGMv2_0609_33_13
Type: pfam
Location: 16266 - 16820 (-)
Gene ID: HRGMv2_0609_33_14
Type: CAZyme
Location: 16979 - 18061 (-)
Gene ID: HRGMv2_0609_33_15
Type: pfam
Location: 18263 - 20206 (+)
Gene ID: HRGMv2_0609_33_16
Type: TC
Location: 20270 - 20836 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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