Cluster: HRGMv2_0609_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0609
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0609_1 | HRGMv2_0609_1_210 | 216088 | 217773 | + | 2.A.14.1.1 |
| TF | HRGMv2_0609_1 | HRGMv2_0609_1_211 | 217794 | 218564 | + | GntR |
| sulfatase | HRGMv2_0609_1 | HRGMv2_0609_1_212 | 218561 | 219700 | + | S1_6 |
| CAZyme | HRGMv2_0609_1 | HRGMv2_0609_1_213 | 219714 | 222020 | - | GT51 |
Gene ID: HRGMv2_0609_1_210
Type: TC
Location: 216088 - 217773 (+)
Type: TC
Location: 216088 - 217773 (+)
Gene ID: HRGMv2_0609_1_211
Type: TF
Location: 217794 - 218564 (+)
Type: TF
Location: 217794 - 218564 (+)
Gene ID: HRGMv2_0609_1_212
Type: sulfatase
Location: 218561 - 219700 (+)
Type: sulfatase
Location: 218561 - 219700 (+)
Gene ID: HRGMv2_0609_1_213
Type: CAZyme
Location: 219714 - 222020 (-)
Type: CAZyme
Location: 219714 - 222020 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Comamonas
Species
Comamonas kerstersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.