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Cluster: HRGMv2_0609_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0609_31 HRGMv2_0609_31_2 1117 1791 + 3.A.1.101.1
TC HRGMv2_0609_31 HRGMv2_0609_31_3 1788 2912 + 8.A.4.1.1
TC HRGMv2_0609_31 HRGMv2_0609_31_4 2923 4842 + 1.B.18.1.2
pfam HRGMv2_0609_31 HRGMv2_0609_31_5 4916 6073 + Epimerase_2
pfam HRGMv2_0609_31 HRGMv2_0609_31_6 6147 7403 + UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_0609_31 HRGMv2_0609_31_7 7420 12663 + GT4
pfam HRGMv2_0609_31 HRGMv2_0609_31_8 12772 14961 + Hepar_II_III_C | Hepar_II_III_N
pfam HRGMv2_0609_31 HRGMv2_0609_31_9 15091 16014 + Glyco_trans_1_2
CAZyme HRGMv2_0609_31 HRGMv2_0609_31_10 16014 18113 + GT107 | GT107
TC HRGMv2_0609_31 HRGMv2_0609_31_11 18201 19631 + 9.A.41.1.3
Gene ID: HRGMv2_0609_31_2
Type: TC
Location: 1117 - 1791 (+)
Gene ID: HRGMv2_0609_31_3
Type: TC
Location: 1788 - 2912 (+)
Gene ID: HRGMv2_0609_31_4
Type: TC
Location: 2923 - 4842 (+)
Gene ID: HRGMv2_0609_31_5
Type: pfam
Location: 4916 - 6073 (+)
Gene ID: HRGMv2_0609_31_6
Type: pfam
Location: 6147 - 7403 (+)
Gene ID: HRGMv2_0609_31_7
Type: CAZyme
Location: 7420 - 12663 (+)
Gene ID: HRGMv2_0609_31_8
Type: pfam
Location: 12772 - 14961 (+)
Gene ID: HRGMv2_0609_31_9
Type: pfam
Location: 15091 - 16014 (+)
Gene ID: HRGMv2_0609_31_10
Type: CAZyme
Location: 16014 - 18113 (+)
Gene ID: HRGMv2_0609_31_11
Type: TC
Location: 18201 - 19631 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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