Cluster: HRGMv2_0609_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0609
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0609_27 | HRGMv2_0609_27_2 | 7171 | 8427 | + | GT1 |
| TC | HRGMv2_0609_27 | HRGMv2_0609_27_3 | 8415 | 9779 | + | 8.A.1.3.2 |
| NULL(UNKNOWN) | HRGMv2_0609_27 | HRGMv2_0609_27_4 | 9776 | 10306 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0609_27 | HRGMv2_0609_27_5 | 10216 | 10560 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0609_27 | HRGMv2_0609_27_6 | 10557 | 11066 | - | GH24 |
Gene ID: HRGMv2_0609_27_2
Type: CAZyme
Location: 7171 - 8427 (+)
Type: CAZyme
Location: 7171 - 8427 (+)
Gene ID: HRGMv2_0609_27_3
Type: TC
Location: 8415 - 9779 (+)
Type: TC
Location: 8415 - 9779 (+)
Gene ID: HRGMv2_0609_27_4
Type:
Location: 9776 - 10306 (+)
Type:
Location: 9776 - 10306 (+)
Gene ID: HRGMv2_0609_27_5
Type:
Location: 10216 - 10560 (-)
Type:
Location: 10216 - 10560 (-)
Gene ID: HRGMv2_0609_27_6
Type: CAZyme
Location: 10557 - 11066 (-)
Type: CAZyme
Location: 10557 - 11066 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Comamonas
Species
Comamonas kerstersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.