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Cluster: HRGMv2_0609_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0609_8 HRGMv2_0609_8_34 44871 46145 - 2.A.27.1.2
pfam HRGMv2_0609_8 HRGMv2_0609_8_35 46330 47445 + URO-D
TC HRGMv2_0609_8 HRGMv2_0609_8_36 47842 50013 + 3.A.11.3.1
pfam HRGMv2_0609_8 HRGMv2_0609_8_37 50097 50927 - YdjC
pfam HRGMv2_0609_8 HRGMv2_0609_8_38 50932 51339 - GtrA_DPMS_TM
CAZyme HRGMv2_0609_8 HRGMv2_0609_8_39 51336 52352 - GT2
pfam HRGMv2_0609_8 HRGMv2_0609_8_40 52349 53959 - PMT_2
TC HRGMv2_0609_8 HRGMv2_0609_8_41 54016 54963 - 2.A.69.3.4
Gene ID: HRGMv2_0609_8_34
Type: TC
Location: 44871 - 46145 (-)
Gene ID: HRGMv2_0609_8_35
Type: pfam
Location: 46330 - 47445 (+)
Gene ID: HRGMv2_0609_8_36
Type: TC
Location: 47842 - 50013 (+)
Gene ID: HRGMv2_0609_8_37
Type: pfam
Location: 50097 - 50927 (-)
Gene ID: HRGMv2_0609_8_38
Type: pfam
Location: 50932 - 51339 (-)
Gene ID: HRGMv2_0609_8_39
Type: CAZyme
Location: 51336 - 52352 (-)
Gene ID: HRGMv2_0609_8_40
Type: pfam
Location: 52349 - 53959 (-)
Gene ID: HRGMv2_0609_8_41
Type: TC
Location: 54016 - 54963 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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