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Cluster: HRGMv2_0609_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0609_6 HRGMv2_0609_6_113 131783 132952 + CBM50
pfam HRGMv2_0609_6 HRGMv2_0609_6_114 132955 134133 + DNA_processg_A | DprA_WH | DprA_N
TC HRGMv2_0609_6 HRGMv2_0609_6_115 134180 135130 - 2.A.6.4.1
TC HRGMv2_0609_6 HRGMv2_0609_6_116 135142 137010 - 2.A.6.4.1
TC HRGMv2_0609_6 HRGMv2_0609_6_117 137102 137431 - 3.A.5.1.1
pfam HRGMv2_0609_6 HRGMv2_0609_6_118 137691 141260 - POR | TPP_enzyme_C | DUF6537
TF HRGMv2_0609_6 HRGMv2_0609_6_119 141289 141888 + MarR
TC HRGMv2_0609_6 HRGMv2_0609_6_120 141965 143626 + 2.A.1.30.1
TC HRGMv2_0609_6 HRGMv2_0609_6_121 144112 144876 + 2.A.109.1.5
NULL(UNKNOWN) HRGMv2_0609_6 HRGMv2_0609_6_122 144989 145465 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0609_6 HRGMv2_0609_6_123 145541 145900 + 1.E.40.3.2
peptidase HRGMv2_0609_6 HRGMv2_0609_6_124 145874 147409 - M48.UPC
pfam HRGMv2_0609_6 HRGMv2_0609_6_125 147558 148061 + MoaC
TC HRGMv2_0609_6 HRGMv2_0609_6_126 148155 148661 - 3.A.15.2.1
Gene ID: HRGMv2_0609_6_113
Type: CAZyme
Location: 131783 - 132952 (+)
Gene ID: HRGMv2_0609_6_114
Type: pfam
Location: 132955 - 134133 (+)
Gene ID: HRGMv2_0609_6_115
Type: TC
Location: 134180 - 135130 (-)
Gene ID: HRGMv2_0609_6_116
Type: TC
Location: 135142 - 137010 (-)
Gene ID: HRGMv2_0609_6_117
Type: TC
Location: 137102 - 137431 (-)
Gene ID: HRGMv2_0609_6_118
Type: pfam
Location: 137691 - 141260 (-)
Gene ID: HRGMv2_0609_6_119
Type: TF
Location: 141289 - 141888 (+)
Gene ID: HRGMv2_0609_6_120
Type: TC
Location: 141965 - 143626 (+)
Gene ID: HRGMv2_0609_6_121
Type: TC
Location: 144112 - 144876 (+)
Gene ID: HRGMv2_0609_6_122
Type:
Location: 144989 - 145465 (+)
Gene ID: HRGMv2_0609_6_123
Type: TC
Location: 145541 - 145900 (+)
Gene ID: HRGMv2_0609_6_124
Type: peptidase
Location: 145874 - 147409 (-)
Gene ID: HRGMv2_0609_6_125
Type: pfam
Location: 147558 - 148061 (+)
Gene ID: HRGMv2_0609_6_126
Type: TC
Location: 148155 - 148661 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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