dbCAN Logo

Cluster: HRGMv2_0608_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0608_16 HRGMv2_0608_16_3 1577 2374 - 3.A.1.5.3
TC HRGMv2_0608_16 HRGMv2_0608_16_4 2367 4175 - 3.A.1.5.40
TC HRGMv2_0608_16 HRGMv2_0608_16_5 4175 5203 - 3.A.1.5.3
TC HRGMv2_0608_16 HRGMv2_0608_16_6 5210 6844 - 3.A.1.5.3
pfam HRGMv2_0608_16 HRGMv2_0608_16_7 7049 7978 + Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
pfam HRGMv2_0608_16 HRGMv2_0608_16_8 8061 9014 - Zeta_toxin | AAA_33
CAZyme HRGMv2_0608_16 HRGMv2_0608_16_9 9089 9916 - GT2
TC HRGMv2_0608_16 HRGMv2_0608_16_10 10085 11167 - 1.B.1.4.1
Gene ID: HRGMv2_0608_16_3
Type: TC
Location: 1577 - 2374 (-)
Gene ID: HRGMv2_0608_16_4
Type: TC
Location: 2367 - 4175 (-)
Gene ID: HRGMv2_0608_16_5
Type: TC
Location: 4175 - 5203 (-)
Gene ID: HRGMv2_0608_16_6
Type: TC
Location: 5210 - 6844 (-)
Gene ID: HRGMv2_0608_16_7
Type: pfam
Location: 7049 - 7978 (+)
Gene ID: HRGMv2_0608_16_8
Type: pfam
Location: 8061 - 9014 (-)
Gene ID: HRGMv2_0608_16_9
Type: CAZyme
Location: 9089 - 9916 (-)
Gene ID: HRGMv2_0608_16_10
Type: TC
Location: 10085 - 11167 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List