Cluster: HRGMv2_0601_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0601
- CGC Family ID: CGCFAM_09734
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0601_22 | HRGMv2_0601_22_9 | 9096 | 9467 | + | 2.A.7.34.3 |
| pfam | HRGMv2_0601_22 | HRGMv2_0601_22_10 | 9571 | 10737 | - | Lip_A_acyltrans |
| CAZyme | HRGMv2_0601_22 | HRGMv2_0601_22_11 | 10734 | 12179 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_0601_22 | HRGMv2_0601_22_12 | 12223 | 12384 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0601_22 | HRGMv2_0601_22_13 | 12602 | 15055 | + | 2.A.37.1.5 |
| TC | HRGMv2_0601_22 | HRGMv2_0601_22_14 | 15273 | 16757 | - | 2.A.66.1.37 |
Gene ID: HRGMv2_0601_22_9
Type: TC
Location: 9096 - 9467 (+)
Type: TC
Location: 9096 - 9467 (+)
Gene ID: HRGMv2_0601_22_10
Type: pfam
Location: 9571 - 10737 (-)
Type: pfam
Location: 9571 - 10737 (-)
Gene ID: HRGMv2_0601_22_11
Type: CAZyme
Location: 10734 - 12179 (-)
Type: CAZyme
Location: 10734 - 12179 (-)
Gene ID: HRGMv2_0601_22_12
Type:
Location: 12223 - 12384 (-)
Type:
Location: 12223 - 12384 (-)
Gene ID: HRGMv2_0601_22_13
Type: TC
Location: 12602 - 15055 (+)
Type: TC
Location: 12602 - 15055 (+)
Gene ID: HRGMv2_0601_22_14
Type: TC
Location: 15273 - 16757 (-)
Type: TC
Location: 15273 - 16757 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Sutterella
Species
Sutterella sp905213905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.