Cluster: HRGMv2_0601_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0601
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0601_45 | HRGMv2_0601_45_33 | 43313 | 44314 | + | 2.A.80.1.3 |
| pfam | HRGMv2_0601_45 | HRGMv2_0601_45_34 | 44891 | 45355 | + | TctB |
| TC | HRGMv2_0601_45 | HRGMv2_0601_45_35 | 45366 | 46877 | + | 2.A.80.1.2 |
| pfam | HRGMv2_0601_45 | HRGMv2_0601_45_36 | 47066 | 47461 | - | DDE_Tnp_ISL3 |
| pfam | HRGMv2_0601_45 | HRGMv2_0601_45_37 | 47656 | 48231 | - | DDE_Tnp_ISL3 |
| CAZyme | HRGMv2_0601_45 | HRGMv2_0601_45_38 | 48689 | 49759 | + | GT2 |
Gene ID: HRGMv2_0601_45_33
Type: TC
Location: 43313 - 44314 (+)
Type: TC
Location: 43313 - 44314 (+)
Gene ID: HRGMv2_0601_45_34
Type: pfam
Location: 44891 - 45355 (+)
Type: pfam
Location: 44891 - 45355 (+)
Gene ID: HRGMv2_0601_45_35
Type: TC
Location: 45366 - 46877 (+)
Type: TC
Location: 45366 - 46877 (+)
Gene ID: HRGMv2_0601_45_36
Type: pfam
Location: 47066 - 47461 (-)
Type: pfam
Location: 47066 - 47461 (-)
Gene ID: HRGMv2_0601_45_37
Type: pfam
Location: 47656 - 48231 (-)
Type: pfam
Location: 47656 - 48231 (-)
Gene ID: HRGMv2_0601_45_38
Type: CAZyme
Location: 48689 - 49759 (+)
Type: CAZyme
Location: 48689 - 49759 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Sutterella
Species
Sutterella sp905213905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.