Cluster: HRGMv2_0598_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0598
- CGC Family ID: CGCFAM_02253
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0598_19 | HRGMv2_0598_19_5 | 3744 | 5345 | - | GH23 |
| TC | HRGMv2_0598_19 | HRGMv2_0598_19_6 | 5390 | 7054 | + | 3.A.1.120.6 |
| pfam | HRGMv2_0598_19 | HRGMv2_0598_19_7 | 7113 | 10538 | + | tRNA_anti-codon | PHP | DNA_pol3_alpha | HHH_6 | DNA_pol3_finger |
| pfam | HRGMv2_0598_19 | HRGMv2_0598_19_8 | 10522 | 11571 | - | Glycos_transf_1 | Glyco_transf_4 | Glyco_trans_1_4 | GT4-conflict |
| CAZyme | HRGMv2_0598_19 | HRGMv2_0598_19_9 | 11617 | 12414 | - | GT2 |
| CAZyme | HRGMv2_0598_19 | HRGMv2_0598_19_10 | 12420 | 13343 | - | GT9 |
| TC | HRGMv2_0598_19 | HRGMv2_0598_19_11 | 13492 | 15288 | + | 3.A.1.106.1 |
Gene ID: HRGMv2_0598_19_5
Type: CAZyme
Location: 3744 - 5345 (-)
Type: CAZyme
Location: 3744 - 5345 (-)
Gene ID: HRGMv2_0598_19_6
Type: TC
Location: 5390 - 7054 (+)
Type: TC
Location: 5390 - 7054 (+)
Gene ID: HRGMv2_0598_19_7
Type: pfam
Location: 7113 - 10538 (+)
Type: pfam
Location: 7113 - 10538 (+)
Gene ID: HRGMv2_0598_19_8
Type: pfam
Location: 10522 - 11571 (-)
Type: pfam
Location: 10522 - 11571 (-)
Gene ID: HRGMv2_0598_19_9
Type: CAZyme
Location: 11617 - 12414 (-)
Type: CAZyme
Location: 11617 - 12414 (-)
Gene ID: HRGMv2_0598_19_10
Type: CAZyme
Location: 12420 - 13343 (-)
Type: CAZyme
Location: 12420 - 13343 (-)
Gene ID: HRGMv2_0598_19_11
Type: TC
Location: 13492 - 15288 (+)
Type: TC
Location: 13492 - 15288 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Duodenibacillus
Species
Duodenibacillus sp900552915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.