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Cluster: HRGMv2_0597_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0597_37 HRGMv2_0597_37_50 72370 74463 + GT107 | GT107
pfam HRGMv2_0597_37 HRGMv2_0597_37_51 74511 74876 + DUF5061
TC HRGMv2_0597_37 HRGMv2_0597_37_52 74863 75678 + 3.A.1.101.1
TC HRGMv2_0597_37 HRGMv2_0597_37_53 75675 76346 + 3.A.1.101.3
TC HRGMv2_0597_37 HRGMv2_0597_37_54 76324 77562 + 8.A.4.2.1
TC HRGMv2_0597_37 HRGMv2_0597_37_55 77581 79392 + 1.B.18.1.2
TC HRGMv2_0597_37 HRGMv2_0597_37_56 79545 80537 + 2.A.56.1.6
TC HRGMv2_0597_37 HRGMv2_0597_37_57 80592 81887 + 2.A.56.1.6
Gene ID: HRGMv2_0597_37_50
Type: CAZyme
Location: 72370 - 74463 (+)
Gene ID: HRGMv2_0597_37_51
Type: pfam
Location: 74511 - 74876 (+)
Gene ID: HRGMv2_0597_37_52
Type: TC
Location: 74863 - 75678 (+)
Gene ID: HRGMv2_0597_37_53
Type: TC
Location: 75675 - 76346 (+)
Gene ID: HRGMv2_0597_37_54
Type: TC
Location: 76324 - 77562 (+)
Gene ID: HRGMv2_0597_37_55
Type: TC
Location: 77581 - 79392 (+)
Gene ID: HRGMv2_0597_37_56
Type: TC
Location: 79545 - 80537 (+)
Gene ID: HRGMv2_0597_37_57
Type: TC
Location: 80592 - 81887 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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