dbCAN Logo

Cluster: HRGMv2_0593_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0593_9 HRGMv2_0593_9_2 1278 2660 - 2.A.61.1.2
NULL(UNKNOWN) HRGMv2_0593_9 HRGMv2_0593_9_3 2771 3646 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0593_9 HRGMv2_0593_9_4 3684 4628 - GT9
TC HRGMv2_0593_9 HRGMv2_0593_9_5 4710 6512 + 3.A.1.106.1
TC HRGMv2_0593_9 HRGMv2_0593_9_6 6768 8294 + 2.A.47.1.12
pfam HRGMv2_0593_9 HRGMv2_0593_9_7 8397 9335 + EamA
pfam HRGMv2_0593_9 HRGMv2_0593_9_8 9360 9605 + RelB
TC HRGMv2_0593_9 HRGMv2_0593_9_9 9731 11239 - 2.A.21.8.3
Gene ID: HRGMv2_0593_9_2
Type: TC
Location: 1278 - 2660 (-)
Gene ID: HRGMv2_0593_9_3
Type:
Location: 2771 - 3646 (-)
Gene ID: HRGMv2_0593_9_4
Type: CAZyme
Location: 3684 - 4628 (-)
Gene ID: HRGMv2_0593_9_5
Type: TC
Location: 4710 - 6512 (+)
Gene ID: HRGMv2_0593_9_6
Type: TC
Location: 6768 - 8294 (+)
Gene ID: HRGMv2_0593_9_7
Type: pfam
Location: 8397 - 9335 (+)
Gene ID: HRGMv2_0593_9_8
Type: pfam
Location: 9360 - 9605 (+)
Gene ID: HRGMv2_0593_9_9
Type: TC
Location: 9731 - 11239 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List