Cluster: HRGMv2_0593_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0593
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0593_5 | HRGMv2_0593_5_28 | 29636 | 30712 | - | GT28 |
| TC | HRGMv2_0593_5 | HRGMv2_0593_5_29 | 30709 | 31944 | - | 2.A.103.1.1 |
| pfam | HRGMv2_0593_5 | HRGMv2_0593_5_30 | 31938 | 33368 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_0593_5 | HRGMv2_0593_5_31 | 33376 | 34539 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_0593_5_28
Type: CAZyme
Location: 29636 - 30712 (-)
Type: CAZyme
Location: 29636 - 30712 (-)
Gene ID: HRGMv2_0593_5_29
Type: TC
Location: 30709 - 31944 (-)
Type: TC
Location: 30709 - 31944 (-)
Gene ID: HRGMv2_0593_5_30
Type: pfam
Location: 31938 - 33368 (-)
Type: pfam
Location: 31938 - 33368 (-)
Gene ID: HRGMv2_0593_5_31
Type: TC
Location: 33376 - 34539 (-)
Type: TC
Location: 33376 - 34539 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Turicimonas
Species
Turicimonas sp900542195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.