Cluster: HRGMv2_0592_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0592
- CGC Family ID: CGCFAM_01221
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0592_81 | HRGMv2_0592_81_1 | 1 | 636 | - | 2.A.47.1.12 |
| TC | HRGMv2_0592_81 | HRGMv2_0592_81_2 | 892 | 2694 | - | 3.A.1.106.1 |
| CAZyme | HRGMv2_0592_81 | HRGMv2_0592_81_3 | 2776 | 3720 | + | GT9 |
| NULL(UNKNOWN) | HRGMv2_0592_81 | HRGMv2_0592_81_4 | 3758 | 4633 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0592_81 | HRGMv2_0592_81_5 | 4744 | 6126 | + | 2.A.61.1.2 |
Gene ID: HRGMv2_0592_81_1
Type: TC
Location: 1 - 636 (-)
Type: TC
Location: 1 - 636 (-)
Gene ID: HRGMv2_0592_81_2
Type: TC
Location: 892 - 2694 (-)
Type: TC
Location: 892 - 2694 (-)
Gene ID: HRGMv2_0592_81_3
Type: CAZyme
Location: 2776 - 3720 (+)
Type: CAZyme
Location: 2776 - 3720 (+)
Gene ID: HRGMv2_0592_81_4
Type:
Location: 3758 - 4633 (+)
Type:
Location: 3758 - 4633 (+)
Gene ID: HRGMv2_0592_81_5
Type: TC
Location: 4744 - 6126 (+)
Type: TC
Location: 4744 - 6126 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Turicimonas
Species
Turicimonas sp900542195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.