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Cluster: HRGMv2_0591_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0591_11 HRGMv2_0591_11_8 9665 10477 - GT2
CAZyme HRGMv2_0591_11 HRGMv2_0591_11_9 10545 11324 + GT2
CAZyme HRGMv2_0591_11 HRGMv2_0591_11_10 11324 12307 + GT73
CAZyme HRGMv2_0591_11 HRGMv2_0591_11_11 12246 13352 - GT4
pfam HRGMv2_0591_11 HRGMv2_0591_11_12 13330 14661 - Wzy_C
TC HRGMv2_0591_11 HRGMv2_0591_11_13 14716 16686 - 9.B.97.5.1
pfam HRGMv2_0591_11 HRGMv2_0591_11_14 17240 18220 + NAD_Gly3P_dh_N | ApbA | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact
TC HRGMv2_0591_11 HRGMv2_0591_11_15 18240 19691 - 9.B.18.1.2
Gene ID: HRGMv2_0591_11_8
Type: CAZyme
Location: 9665 - 10477 (-)
Gene ID: HRGMv2_0591_11_9
Type: CAZyme
Location: 10545 - 11324 (+)
Gene ID: HRGMv2_0591_11_10
Type: CAZyme
Location: 11324 - 12307 (+)
Gene ID: HRGMv2_0591_11_11
Type: CAZyme
Location: 12246 - 13352 (-)
Gene ID: HRGMv2_0591_11_12
Type: pfam
Location: 13330 - 14661 (-)
Gene ID: HRGMv2_0591_11_13
Type: TC
Location: 14716 - 16686 (-)
Gene ID: HRGMv2_0591_11_14
Type: pfam
Location: 17240 - 18220 (+)
Gene ID: HRGMv2_0591_11_15
Type: TC
Location: 18240 - 19691 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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