dbCAN Logo

Cluster: HRGMv2_0591_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0591_2 HRGMv2_0591_2_2 1384 2766 - 2.A.61.1.2
NULL(UNKNOWN) HRGMv2_0591_2 HRGMv2_0591_2_3 2882 3754 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0591_2 HRGMv2_0591_2_4 3784 4728 - GT9
TC HRGMv2_0591_2 HRGMv2_0591_2_5 4810 6588 + 3.A.1.106.1
TC HRGMv2_0591_2 HRGMv2_0591_2_6 6844 8370 + 2.A.47.1.12
pfam HRGMv2_0591_2 HRGMv2_0591_2_7 8472 9410 + EamA
NULL(UNKNOWN) HRGMv2_0591_2 HRGMv2_0591_2_8 9510 9677 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0591_2 HRGMv2_0591_2_9 9804 11312 - 2.A.21.8.3
Gene ID: HRGMv2_0591_2_2
Type: TC
Location: 1384 - 2766 (-)
Gene ID: HRGMv2_0591_2_3
Type:
Location: 2882 - 3754 (-)
Gene ID: HRGMv2_0591_2_4
Type: CAZyme
Location: 3784 - 4728 (-)
Gene ID: HRGMv2_0591_2_5
Type: TC
Location: 4810 - 6588 (+)
Gene ID: HRGMv2_0591_2_6
Type: TC
Location: 6844 - 8370 (+)
Gene ID: HRGMv2_0591_2_7
Type: pfam
Location: 8472 - 9410 (+)
Gene ID: HRGMv2_0591_2_8
Type:
Location: 9510 - 9677 (+)
Gene ID: HRGMv2_0591_2_9
Type: TC
Location: 9804 - 11312 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List