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Cluster: HRGMv2_0587_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0587_1 HRGMv2_0587_1_225 252312 253247 + GT9
pfam HRGMv2_0587_1 HRGMv2_0587_1_226 253499 254449 + Wzy_C
CAZyme HRGMv2_0587_1 HRGMv2_0587_1_227 254446 255441 + GT2
CAZyme HRGMv2_0587_1 HRGMv2_0587_1_228 255460 256569 + GT4
pfam HRGMv2_0587_1 HRGMv2_0587_1_229 256572 257951 + Kdo | YrbL-PhoP_reg
pfam HRGMv2_0587_1 HRGMv2_0587_1_230 257996 261451 - tRNA_anti-codon | PHP | DNA_pol3_alpha | HHH_6 | DNA_pol3_finger
CAZyme HRGMv2_0587_1 HRGMv2_0587_1_231 261722 262612 - GT101
TC HRGMv2_0587_1 HRGMv2_0587_1_232 262647 264653 - 9.B.97.5.1
Gene ID: HRGMv2_0587_1_225
Type: CAZyme
Location: 252312 - 253247 (+)
Gene ID: HRGMv2_0587_1_226
Type: pfam
Location: 253499 - 254449 (+)
Gene ID: HRGMv2_0587_1_227
Type: CAZyme
Location: 254446 - 255441 (+)
Gene ID: HRGMv2_0587_1_228
Type: CAZyme
Location: 255460 - 256569 (+)
Gene ID: HRGMv2_0587_1_229
Type: pfam
Location: 256572 - 257951 (+)
Gene ID: HRGMv2_0587_1_230
Type: pfam
Location: 257996 - 261451 (-)
Gene ID: HRGMv2_0587_1_231
Type: CAZyme
Location: 261722 - 262612 (-)
Gene ID: HRGMv2_0587_1_232
Type: TC
Location: 262647 - 264653 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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