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Cluster: HRGMv2_0579_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0579_3 HRGMv2_0579_3_88 109006 110010 - 2.A.7.3.19
pfam HRGMv2_0579_3 HRGMv2_0579_3_89 110809 111813 + ABC_sub_bind
TC HRGMv2_0579_3 HRGMv2_0579_3_90 111924 112802 + 3.A.1.34.1
TC HRGMv2_0579_3 HRGMv2_0579_3_91 112815 113603 + 3.A.1.34.1
CAZyme HRGMv2_0579_3 HRGMv2_0579_3_92 113683 114936 - GH103
pfam HRGMv2_0579_3 HRGMv2_0579_3_93 115128 116090 + Hist_deacetyl
TC HRGMv2_0579_3 HRGMv2_0579_3_94 116090 117406 + 2.A.1.24.3
TC HRGMv2_0579_3 HRGMv2_0579_3_95 117504 118268 - 1.B.33.1.3
Gene ID: HRGMv2_0579_3_88
Type: TC
Location: 109006 - 110010 (-)
Gene ID: HRGMv2_0579_3_89
Type: pfam
Location: 110809 - 111813 (+)
Gene ID: HRGMv2_0579_3_90
Type: TC
Location: 111924 - 112802 (+)
Gene ID: HRGMv2_0579_3_91
Type: TC
Location: 112815 - 113603 (+)
Gene ID: HRGMv2_0579_3_92
Type: CAZyme
Location: 113683 - 114936 (-)
Gene ID: HRGMv2_0579_3_93
Type: pfam
Location: 115128 - 116090 (+)
Gene ID: HRGMv2_0579_3_94
Type: TC
Location: 116090 - 117406 (+)
Gene ID: HRGMv2_0579_3_95
Type: TC
Location: 117504 - 118268 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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