Cluster: HRGMv2_0579_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0579
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0579_1 | HRGMv2_0579_1_438 | 470119 | 470433 | + | 9.B.21.2.1 |
| CAZyme | HRGMv2_0579_1 | HRGMv2_0579_1_439 | 470506 | 472863 | - | GT51 |
| pfam | HRGMv2_0579_1 | HRGMv2_0579_1_440 | 473060 | 473542 | + | Acyl-ACP_TE | 4HBT | 4HBT_2 | Acyl-ACP_TE_C |
| TC | HRGMv2_0579_1 | HRGMv2_0579_1_441 | 473552 | 474355 | + | 3.A.1.27.3 |
| TC | HRGMv2_0579_1 | HRGMv2_0579_1_442 | 474352 | 475128 | + | 3.A.1.27.3 |
| TC | HRGMv2_0579_1 | HRGMv2_0579_1_443 | 475187 | 475657 | + | 3.A.1.27.3 |
Gene ID: HRGMv2_0579_1_438
Type: TC
Location: 470119 - 470433 (+)
Type: TC
Location: 470119 - 470433 (+)
Gene ID: HRGMv2_0579_1_439
Type: CAZyme
Location: 470506 - 472863 (-)
Type: CAZyme
Location: 470506 - 472863 (-)
Gene ID: HRGMv2_0579_1_440
Type: pfam
Location: 473060 - 473542 (+)
Type: pfam
Location: 473060 - 473542 (+)
Gene ID: HRGMv2_0579_1_441
Type: TC
Location: 473552 - 474355 (+)
Type: TC
Location: 473552 - 474355 (+)
Gene ID: HRGMv2_0579_1_442
Type: TC
Location: 474352 - 475128 (+)
Type: TC
Location: 474352 - 475128 (+)
Gene ID: HRGMv2_0579_1_443
Type: TC
Location: 475187 - 475657 (+)
Type: TC
Location: 475187 - 475657 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Sutterella
Species
Sutterella sp949287305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.