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Cluster: HRGMv2_0574_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0574_73 HRGMv2_0574_73_33 35962 36678 + 2.A.78.1.1
pfam HRGMv2_0574_73 HRGMv2_0574_73_34 36671 37000 + AzlD
CAZyme HRGMv2_0574_73 HRGMv2_0574_73_35 37134 39545 + GT51
pfam HRGMv2_0574_73 HRGMv2_0574_73_36 39852 40478 - Nitrate_red_del
TC HRGMv2_0574_73 HRGMv2_0574_73_37 40530 41225 - 5.A.3.11.1
TC HRGMv2_0574_73 HRGMv2_0574_73_38 41216 43987 - 5.A.3.11.1
TF HRGMv2_0574_73 HRGMv2_0574_73_39 44067 45071 + HTH_1
TC HRGMv2_0574_73 HRGMv2_0574_73_40 45139 46401 - 1.A.11.1.4
Gene ID: HRGMv2_0574_73_33
Type: TC
Location: 35962 - 36678 (+)
Gene ID: HRGMv2_0574_73_34
Type: pfam
Location: 36671 - 37000 (+)
Gene ID: HRGMv2_0574_73_35
Type: CAZyme
Location: 37134 - 39545 (+)
Gene ID: HRGMv2_0574_73_36
Type: pfam
Location: 39852 - 40478 (-)
Gene ID: HRGMv2_0574_73_37
Type: TC
Location: 40530 - 41225 (-)
Gene ID: HRGMv2_0574_73_38
Type: TC
Location: 41216 - 43987 (-)
Gene ID: HRGMv2_0574_73_39
Type: TF
Location: 44067 - 45071 (+)
Gene ID: HRGMv2_0574_73_40
Type: TC
Location: 45139 - 46401 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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