Cluster: HRGMv2_0572_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0572
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0572_60 | HRGMv2_0572_60_7 | 7008 | 8585 | - | 2.A.35.2.1 |
| pfam | HRGMv2_0572_60 | HRGMv2_0572_60_8 | 8887 | 9444 | - | EFP | EFP_N | Elong-fact-P_C |
| CAZyme | HRGMv2_0572_60 | HRGMv2_0572_60_9 | 9666 | 10754 | - | GT104 |
| pfam | HRGMv2_0572_60 | HRGMv2_0572_60_10 | 10955 | 12907 | + | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | HRGMv2_0572_60 | HRGMv2_0572_60_11 | 12891 | 13490 | + | 4.F.1.1.8 |
Gene ID: HRGMv2_0572_60_7
Type: TC
Location: 7008 - 8585 (-)
Type: TC
Location: 7008 - 8585 (-)
Gene ID: HRGMv2_0572_60_8
Type: pfam
Location: 8887 - 9444 (-)
Type: pfam
Location: 8887 - 9444 (-)
Gene ID: HRGMv2_0572_60_9
Type: CAZyme
Location: 9666 - 10754 (-)
Type: CAZyme
Location: 9666 - 10754 (-)
Gene ID: HRGMv2_0572_60_10
Type: pfam
Location: 10955 - 12907 (+)
Type: pfam
Location: 10955 - 12907 (+)
Gene ID: HRGMv2_0572_60_11
Type: TC
Location: 12891 - 13490 (+)
Type: TC
Location: 12891 - 13490 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Parasutterella
Species
Parasutterella sp900552195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.