dbCAN HGM

Cluster: HRGMv2_0566_CGC4

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0566_28	HRGMv2_0566_28_13	10498	11265	-	3.A.1.27.3
TC	HRGMv2_0566_28	HRGMv2_0566_28_14	11268	11738	-	3.A.1.27.3
TC	HRGMv2_0566_28	HRGMv2_0566_28_15	11763	12539	-	3.A.1.27.3
TC	HRGMv2_0566_28	HRGMv2_0566_28_16	12540	13355	-	3.A.1.27.3
pfam	HRGMv2_0566_28	HRGMv2_0566_28_17	13359	13856	-	Acyl-ACP_TE \| 4HBT \| 4HBT_2
CAZyme	HRGMv2_0566_28	HRGMv2_0566_28_18	14132	16498	+	GT51

Gene ID: HRGMv2_0566_28_13
Type: TC
Location: 10498 - 11265 (-)

Gene ID: HRGMv2_0566_28_14
Type: TC
Location: 11268 - 11738 (-)

Gene ID: HRGMv2_0566_28_15
Type: TC
Location: 11763 - 12539 (-)

Gene ID: HRGMv2_0566_28_16
Type: TC
Location: 12540 - 13355 (-)

Gene ID: HRGMv2_0566_28_17
Type: pfam
Location: 13359 - 13856 (-)

Gene ID: HRGMv2_0566_28_18
Type: CAZyme
Location: 14132 - 16498 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0566_28_13	vegetarian > omnivore	1.39668	0.00667
HRGMv2_0566_28_13	vegetarian > vegan	1.11815	0.01062
HRGMv2_0566_28_14	vegetarian > omnivore	1.37756	0.00667
HRGMv2_0566_28_15	vegetarian > vegan	1.05634	0.01062
HRGMv2_0566_28_17	vegetarian > omnivore	1.07556	0.00667
HRGMv2_0566_28_17	vegetarian > vegan	1.30100	0.01062