dbCAN HGM

Cluster: HRGMv2_0566_CGC2

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0566_11	HRGMv2_0566_11_12	16482	17546	+	GT9
TC	HRGMv2_0566_11	HRGMv2_0566_11_13	17532	18482	-	2.A.7.3.19
TC	HRGMv2_0566_11	HRGMv2_0566_11_14	18560	20320	-	3.A.1.106.1
CAZyme	HRGMv2_0566_11	HRGMv2_0566_11_15	20415	21476	+	GT4
CAZyme	HRGMv2_0566_11	HRGMv2_0566_11_16	21490	22425	+	GT9
pfam	HRGMv2_0566_11	HRGMv2_0566_11_17	22420	24081	-	SMC_N \| AAA_23
pfam	HRGMv2_0566_11	HRGMv2_0566_11_18	24109	25017	-	NAD_kinase \| NAD_kinase_C
CAZyme	HRGMv2_0566_11	HRGMv2_0566_11_19	25017	25778	-	GT2
pfam	HRGMv2_0566_11	HRGMv2_0566_11_20	25881	26672	-	adh_short \| adh_short_C2
CAZyme	HRGMv2_0566_11	HRGMv2_0566_11_21	26807	28915	-	GH23

Gene ID: HRGMv2_0566_11_12
Type: CAZyme
Location: 16482 - 17546 (+)

Gene ID: HRGMv2_0566_11_13
Type: TC
Location: 17532 - 18482 (-)

Gene ID: HRGMv2_0566_11_14
Type: TC
Location: 18560 - 20320 (-)

Gene ID: HRGMv2_0566_11_15
Type: CAZyme
Location: 20415 - 21476 (+)

Gene ID: HRGMv2_0566_11_16
Type: CAZyme
Location: 21490 - 22425 (+)

Gene ID: HRGMv2_0566_11_17
Type: pfam
Location: 22420 - 24081 (-)

Gene ID: HRGMv2_0566_11_18
Type: pfam
Location: 24109 - 25017 (-)

Gene ID: HRGMv2_0566_11_19
Type: CAZyme
Location: 25017 - 25778 (-)

Gene ID: HRGMv2_0566_11_20
Type: pfam
Location: 25881 - 26672 (-)

Gene ID: HRGMv2_0566_11_21
Type: CAZyme
Location: 26807 - 28915 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0566_11_13	vegetarian > omnivore	1.35382	0.00667
HRGMv2_0566_11_13	vegetarian > vegan	2.13563	0.01062
HRGMv2_0566_11_20	vegan > omnivore	1.60740	0.03830
HRGMv2_0566_11_20	vegetarian > omnivore	1.85894	0.00667
HRGMv2_0566_11_21	vegetarian > omnivore	1.17720	0.00667
HRGMv2_0566_11_21	vegetarian > vegan	1.34003	0.01062