dbCAN HGM

Cluster: HRGMv2_0565_CGC4

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0565_9	HRGMv2_0565_9_35	20670	23036	-	GT51
pfam	HRGMv2_0565_9	HRGMv2_0565_9_36	23311	23808	+	Acyl-ACP_TE \| 4HBT \| 4HBT_2
TC	HRGMv2_0565_9	HRGMv2_0565_9_37	23812	24627	+	3.A.1.27.3
TC	HRGMv2_0565_9	HRGMv2_0565_9_38	24628	25404	+	3.A.1.27.3
TC	HRGMv2_0565_9	HRGMv2_0565_9_39	25429	25899	+	3.A.1.27.3
TC	HRGMv2_0565_9	HRGMv2_0565_9_40	25902	26669	+	3.A.1.27.3

Gene ID: HRGMv2_0565_9_35
Type: CAZyme
Location: 20670 - 23036 (-)

Gene ID: HRGMv2_0565_9_36
Type: pfam
Location: 23311 - 23808 (+)

Gene ID: HRGMv2_0565_9_37
Type: TC
Location: 23812 - 24627 (+)

Gene ID: HRGMv2_0565_9_38
Type: TC
Location: 24628 - 25404 (+)

Gene ID: HRGMv2_0565_9_39
Type: TC
Location: 25429 - 25899 (+)

Gene ID: HRGMv2_0565_9_40
Type: TC
Location: 25902 - 26669 (+)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0565_9_36	vegetarian > omnivore	1.33251	0.01147
HRGMv2_0565_9_38	vegan > omnivore	1.70079	0.02034
HRGMv2_0565_9_38	vegetarian > omnivore	1.34653	0.01147
HRGMv2_0565_9_40	vegetarian > omnivore	1.43308	0.01147