Cluster: HRGMv2_0565_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0565
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0565_2 | HRGMv2_0565_2_69 | 86688 | 88013 | - | GT4 |
| peptidase | HRGMv2_0565_2 | HRGMv2_0565_2_70 | 88332 | 89549 | + | M20.UPD |
| NULL(UNKNOWN) | HRGMv2_0565_2 | HRGMv2_0565_2_71 | 89582 | 89797 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0565_2 | HRGMv2_0565_2_72 | 89828 | 91147 | + | 3.A.1.5.11 |
Gene ID: HRGMv2_0565_2_69
Type: CAZyme
Location: 86688 - 88013 (-)
Type: CAZyme
Location: 86688 - 88013 (-)
Gene ID: HRGMv2_0565_2_70
Type: peptidase
Location: 88332 - 89549 (+)
Type: peptidase
Location: 88332 - 89549 (+)
Gene ID: HRGMv2_0565_2_71
Type:
Location: 89582 - 89797 (+)
Type:
Location: 89582 - 89797 (+)
Gene ID: HRGMv2_0565_2_72
Type: TC
Location: 89828 - 91147 (+)
Type: TC
Location: 89828 - 91147 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Sutterella
Species
Sutterella seckii_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.