Cluster: HRGMv2_0563_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0563
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0563_3 | HRGMv2_0563_3_105 | 104422 | 104892 | - | 9.B.156.1.2 |
| TC | HRGMv2_0563_3 | HRGMv2_0563_3_106 | 104876 | 105550 | - | 9.A.5.4.2 |
| peptidase | HRGMv2_0563_3 | HRGMv2_0563_3_107 | 105704 | 107356 | - | M20.UPW |
| pfam | HRGMv2_0563_3 | HRGMv2_0563_3_108 | 107527 | 108873 | - | DUF2142 |
| CAZyme | HRGMv2_0563_3 | HRGMv2_0563_3_109 | 109021 | 110007 | - | GT2 |
| CAZyme | HRGMv2_0563_3 | HRGMv2_0563_3_110 | 110596 | 112947 | + | GT51 |
Gene ID: HRGMv2_0563_3_105
Type: TC
Location: 104422 - 104892 (-)
Type: TC
Location: 104422 - 104892 (-)
Gene ID: HRGMv2_0563_3_106
Type: TC
Location: 104876 - 105550 (-)
Type: TC
Location: 104876 - 105550 (-)
Gene ID: HRGMv2_0563_3_107
Type: peptidase
Location: 105704 - 107356 (-)
Type: peptidase
Location: 105704 - 107356 (-)
Gene ID: HRGMv2_0563_3_108
Type: pfam
Location: 107527 - 108873 (-)
Type: pfam
Location: 107527 - 108873 (-)
Gene ID: HRGMv2_0563_3_109
Type: CAZyme
Location: 109021 - 110007 (-)
Type: CAZyme
Location: 109021 - 110007 (-)
Gene ID: HRGMv2_0563_3_110
Type: CAZyme
Location: 110596 - 112947 (+)
Type: CAZyme
Location: 110596 - 112947 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Duodenibacillus
Species
Duodenibacillus sp900544335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.