Cluster: HRGMv2_0563_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0563
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0563_22 | HRGMv2_0563_22_3 | 1154 | 2479 | + | 2.A.13.1.3 |
| TF | HRGMv2_0563_22 | HRGMv2_0563_22_4 | 2572 | 3525 | - | HTH_1 |
| TC | HRGMv2_0563_22 | HRGMv2_0563_22_5 | 3888 | 5237 | + | 2.A.25.1.9 |
| STP | HRGMv2_0563_22 | HRGMv2_0563_22_6 | 5375 | 7270 | + | HATPase_c |
| CAZyme | HRGMv2_0563_22 | HRGMv2_0563_22_7 | 7329 | 8765 | - | GT5 |
Gene ID: HRGMv2_0563_22_3
Type: TC
Location: 1154 - 2479 (+)
Type: TC
Location: 1154 - 2479 (+)
Gene ID: HRGMv2_0563_22_4
Type: TF
Location: 2572 - 3525 (-)
Type: TF
Location: 2572 - 3525 (-)
Gene ID: HRGMv2_0563_22_5
Type: TC
Location: 3888 - 5237 (+)
Type: TC
Location: 3888 - 5237 (+)
Gene ID: HRGMv2_0563_22_6
Type: STP
Location: 5375 - 7270 (+)
Type: STP
Location: 5375 - 7270 (+)
Gene ID: HRGMv2_0563_22_7
Type: CAZyme
Location: 7329 - 8765 (-)
Type: CAZyme
Location: 7329 - 8765 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Duodenibacillus
Species
Duodenibacillus sp900544335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.