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Cluster: HRGMv2_0553_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0553_4 HRGMv2_0553_4_58 72921 74411 + 2.A.50.2.1
pfam HRGMv2_0553_4 HRGMv2_0553_4_59 74522 75874 + UPF0004 | Radical_SAM
pfam HRGMv2_0553_4 HRGMv2_0553_4_60 75998 76933 + Lip_A_acyltrans
CAZyme HRGMv2_0553_4 HRGMv2_0553_4_61 76930 77973 + GT2
pfam HRGMv2_0553_4 HRGMv2_0553_4_62 78166 82752 + TamB
TC HRGMv2_0553_4 HRGMv2_0553_4_63 82939 84276 - 2.A.62.1.3
TC HRGMv2_0553_4 HRGMv2_0553_4_64 85030 86274 + 2.A.1.46.5
Gene ID: HRGMv2_0553_4_58
Type: TC
Location: 72921 - 74411 (+)
Gene ID: HRGMv2_0553_4_59
Type: pfam
Location: 74522 - 75874 (+)
Gene ID: HRGMv2_0553_4_60
Type: pfam
Location: 75998 - 76933 (+)
Gene ID: HRGMv2_0553_4_61
Type: CAZyme
Location: 76930 - 77973 (+)
Gene ID: HRGMv2_0553_4_62
Type: pfam
Location: 78166 - 82752 (+)
Gene ID: HRGMv2_0553_4_63
Type: TC
Location: 82939 - 84276 (-)
Gene ID: HRGMv2_0553_4_64
Type: TC
Location: 85030 - 86274 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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