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Cluster: HRGMv2_0553_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0553_3 HRGMv2_0553_3_83 90472 91389 - 2.A.64.1.3
TC HRGMv2_0553_3 HRGMv2_0553_3_84 91457 91759 - 2.A.64.4.1
pfam HRGMv2_0553_3 HRGMv2_0553_3_85 91944 92822 + Acyl_transf_1
STP HRGMv2_0553_3 HRGMv2_0553_3_86 92944 93114 - Fer4 | Fer4
TC HRGMv2_0553_3 HRGMv2_0553_3_87 93702 95138 + 2.A.114.1.4
pfam HRGMv2_0553_3 HRGMv2_0553_3_88 95330 96166 + PHP
peptidase HRGMv2_0553_3 HRGMv2_0553_3_89 96206 97414 + C11.UPW
TC HRGMv2_0553_3 HRGMv2_0553_3_90 97502 98599 + 1.A.23.2.1
TC HRGMv2_0553_3 HRGMv2_0553_3_91 98841 101105 + 1.B.14.8.5
CAZyme HRGMv2_0553_3 HRGMv2_0553_3_92 101318 102925 + GT83
Gene ID: HRGMv2_0553_3_83
Type: TC
Location: 90472 - 91389 (-)
Gene ID: HRGMv2_0553_3_84
Type: TC
Location: 91457 - 91759 (-)
Gene ID: HRGMv2_0553_3_85
Type: pfam
Location: 91944 - 92822 (+)
Gene ID: HRGMv2_0553_3_86
Type: STP
Location: 92944 - 93114 (-)
Gene ID: HRGMv2_0553_3_87
Type: TC
Location: 93702 - 95138 (+)
Gene ID: HRGMv2_0553_3_88
Type: pfam
Location: 95330 - 96166 (+)
Gene ID: HRGMv2_0553_3_89
Type: peptidase
Location: 96206 - 97414 (+)
Gene ID: HRGMv2_0553_3_90
Type: TC
Location: 97502 - 98599 (+)
Gene ID: HRGMv2_0553_3_91
Type: TC
Location: 98841 - 101105 (+)
Gene ID: HRGMv2_0553_3_92
Type: CAZyme
Location: 101318 - 102925 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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