Cluster: HRGMv2_0553_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0553
- CGC Family ID: CGCFAM_00022
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0553_26 | HRGMv2_0553_26_18 | 23084 | 23854 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_0553_26 | HRGMv2_0553_26_19 | 24131 | 24382 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0553_26 | HRGMv2_0553_26_20 | 24260 | 25348 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0553_26 | HRGMv2_0553_26_21 | 25352 | 26524 | - | GT4 |
| CAZyme | HRGMv2_0553_26 | HRGMv2_0553_26_22 | 26847 | 28016 | + | GT4 |
| TC | HRGMv2_0553_26 | HRGMv2_0553_26_23 | 28119 | 28733 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_0553_26_18
Type: CAZyme
Location: 23084 - 23854 (-)
Type: CAZyme
Location: 23084 - 23854 (-)
Gene ID: HRGMv2_0553_26_19
Type:
Location: 24131 - 24382 (+)
Type:
Location: 24131 - 24382 (+)
Gene ID: HRGMv2_0553_26_20
Type:
Location: 24260 - 25348 (-)
Type:
Location: 24260 - 25348 (-)
Gene ID: HRGMv2_0553_26_21
Type: CAZyme
Location: 25352 - 26524 (-)
Type: CAZyme
Location: 25352 - 26524 (-)
Gene ID: HRGMv2_0553_26_22
Type: CAZyme
Location: 26847 - 28016 (+)
Type: CAZyme
Location: 26847 - 28016 (+)
Gene ID: HRGMv2_0553_26_23
Type: TC
Location: 28119 - 28733 (-)
Type: TC
Location: 28119 - 28733 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp934590135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.