Cluster: HRGMv2_0553_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_0553
- CGC Family ID: CGCFAM_00001
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0553_22 | HRGMv2_0553_22_16 | 16846 | 20622 | - | CBM13 | CBM13 |
| pfam | HRGMv2_0553_22 | HRGMv2_0553_22_17 | 21115 | 22887 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0553_22 | HRGMv2_0553_22_18 | 22907 | 26389 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0553_22_16
Type: CAZyme
Location: 16846 - 20622 (-)
Type: CAZyme
Location: 16846 - 20622 (-)
Gene ID: HRGMv2_0553_22_17
Type: pfam
Location: 21115 - 22887 (-)
Type: pfam
Location: 21115 - 22887 (-)
Gene ID: HRGMv2_0553_22_18
Type: TC
Location: 22907 - 26389 (-)
Type: TC
Location: 22907 - 26389 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp934590135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.