Cluster: HRGMv2_0553_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0553
- CGC Family ID: CGCFAM_01877
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0553_12 | HRGMv2_0553_12_17 | 23455 | 24531 | - | GT4 |
| CAZyme | HRGMv2_0553_12 | HRGMv2_0553_12_18 | 24542 | 25705 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_0553_12 | HRGMv2_0553_12_19 | 25874 | 26506 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0553_12 | HRGMv2_0553_12_20 | 26590 | 27573 | - | GT2 |
| CAZyme | HRGMv2_0553_12 | HRGMv2_0553_12_21 | 27577 | 28497 | - | GT101 |
| TC | HRGMv2_0553_12 | HRGMv2_0553_12_22 | 28494 | 29525 | - | 9.B.97.6.1 |
Gene ID: HRGMv2_0553_12_17
Type: CAZyme
Location: 23455 - 24531 (-)
Type: CAZyme
Location: 23455 - 24531 (-)
Gene ID: HRGMv2_0553_12_18
Type: CAZyme
Location: 24542 - 25705 (-)
Type: CAZyme
Location: 24542 - 25705 (-)
Gene ID: HRGMv2_0553_12_19
Type:
Location: 25874 - 26506 (-)
Type:
Location: 25874 - 26506 (-)
Gene ID: HRGMv2_0553_12_20
Type: CAZyme
Location: 26590 - 27573 (-)
Type: CAZyme
Location: 26590 - 27573 (-)
Gene ID: HRGMv2_0553_12_21
Type: CAZyme
Location: 27577 - 28497 (-)
Type: CAZyme
Location: 27577 - 28497 (-)
Gene ID: HRGMv2_0553_12_22
Type: TC
Location: 28494 - 29525 (-)
Type: TC
Location: 28494 - 29525 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp934590135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.