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Cluster: HRGMv2_0547_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0547_6 HRGMv2_0547_6_45 83518 86508 + GH3
TC HRGMv2_0547_6 HRGMv2_0547_6_46 86511 87473 + 9.B.196.1.2
pfam HRGMv2_0547_6 HRGMv2_0547_6_47 87603 88457 - OmpA
sulfatase HRGMv2_0547_6 HRGMv2_0547_6_48 88596 89930 + S1_16
TC HRGMv2_0547_6 HRGMv2_0547_6_49 89934 90887 - 2.A.4.7.9
Gene ID: HRGMv2_0547_6_45
Type: CAZyme
Location: 83518 - 86508 (+)
Gene ID: HRGMv2_0547_6_46
Type: TC
Location: 86511 - 87473 (+)
Gene ID: HRGMv2_0547_6_47
Type: pfam
Location: 87603 - 88457 (-)
Gene ID: HRGMv2_0547_6_48
Type: sulfatase
Location: 88596 - 89930 (+)
Gene ID: HRGMv2_0547_6_49
Type: TC
Location: 89934 - 90887 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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