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Cluster: HRGMv2_0547_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0547_83 HRGMv2_0547_83_44 45098 45916 - CE1
CAZyme HRGMv2_0547_83 HRGMv2_0547_83_45 46001 46804 + CE4
CAZyme HRGMv2_0547_83 HRGMv2_0547_83_46 46797 47738 + GT2
CAZyme HRGMv2_0547_83 HRGMv2_0547_83_47 47746 49482 - GT83
NULL(UNKNOWN) HRGMv2_0547_83 HRGMv2_0547_83_48 49642 51072 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0547_83 HRGMv2_0547_83_49 51123 52163 - 9.A.40.2.4
NULL(UNKNOWN) HRGMv2_0547_83 HRGMv2_0547_83_50 52241 52519 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0547_83 HRGMv2_0547_83_51 52796 53341 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0547_83 HRGMv2_0547_83_52 53363 54142 - 3.A.1.13.2
TC HRGMv2_0547_83 HRGMv2_0547_83_53 54146 55186 - 3.A.1.13.2
TC HRGMv2_0547_83 HRGMv2_0547_83_54 55183 56316 - 3.A.1.13.2
Gene ID: HRGMv2_0547_83_44
Type: CAZyme
Location: 45098 - 45916 (-)
Gene ID: HRGMv2_0547_83_45
Type: CAZyme
Location: 46001 - 46804 (+)
Gene ID: HRGMv2_0547_83_46
Type: CAZyme
Location: 46797 - 47738 (+)
Gene ID: HRGMv2_0547_83_47
Type: CAZyme
Location: 47746 - 49482 (-)
Gene ID: HRGMv2_0547_83_48
Type:
Location: 49642 - 51072 (+)
Gene ID: HRGMv2_0547_83_49
Type: TC
Location: 51123 - 52163 (-)
Gene ID: HRGMv2_0547_83_50
Type:
Location: 52241 - 52519 (-)
Gene ID: HRGMv2_0547_83_51
Type:
Location: 52796 - 53341 (-)
Gene ID: HRGMv2_0547_83_52
Type: TC
Location: 53363 - 54142 (-)
Gene ID: HRGMv2_0547_83_53
Type: TC
Location: 54146 - 55186 (-)
Gene ID: HRGMv2_0547_83_54
Type: TC
Location: 55183 - 56316 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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