Cluster: HRGMv2_0547_CGC2
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_0547
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0547_6 | HRGMv2_0547_6_2 | 1834 | 5145 | + | 1.B.14.6.2 |
| TC | HRGMv2_0547_6 | HRGMv2_0547_6_3 | 5171 | 7270 | + | 8.A.46.2.2 |
| pfam | HRGMv2_0547_6 | HRGMv2_0547_6_4 | 7304 | 8584 | + | Glyco_tran_WbsX |
| CAZyme | HRGMv2_0547_6 | HRGMv2_0547_6_5 | 8823 | 12512 | + | GH2 |
| CAZyme | HRGMv2_0547_6 | HRGMv2_0547_6_6 | 12572 | 15790 | + | GH2 |
| pfam | HRGMv2_0547_6 | HRGMv2_0547_6_7 | 15812 | 19456 | + | Pect-lyase_RHGA_epim | Pect-lyase_RHGA_epim |
| CAZyme | HRGMv2_0547_6 | HRGMv2_0547_6_8 | 19637 | 21781 | + | GH3 |
| CAZyme | HRGMv2_0547_6 | HRGMv2_0547_6_9 | 21786 | 23780 | + | GH92 |
| CAZyme | HRGMv2_0547_6 | HRGMv2_0547_6_10 | 24136 | 25602 | - | GH28 |
| CAZyme | HRGMv2_0547_6 | HRGMv2_0547_6_11 | 25683 | 28277 | - | GH105 | GH28 |
| pfam | HRGMv2_0547_6 | HRGMv2_0547_6_12 | 28605 | 30089 | + | FGGY_N | FGGY_C |
| pfam | HRGMv2_0547_6 | HRGMv2_0547_6_13 | 30144 | 31460 | + | AP_endonuc_2 |
| TC | HRGMv2_0547_6 | HRGMv2_0547_6_14 | 31572 | 33047 | + | 2.A.1.1.3 |
| CAZyme | HRGMv2_0547_6 | HRGMv2_0547_6_15 | 33269 | 37420 | + | CE8 |
| CAZyme | HRGMv2_0547_6 | HRGMv2_0547_6_16 | 37603 | 39726 | + | PL1_2 |
| pfam | HRGMv2_0547_6 | HRGMv2_0547_6_17 | 39924 | 41378 | + | CBM_6 | CBM_6 |
| CAZyme | HRGMv2_0547_6 | HRGMv2_0547_6_18 | 41825 | 44404 | + | GH3 |
Gene ID: HRGMv2_0547_6_2
Type: TC
Location: 1834 - 5145 (+)
Type: TC
Location: 1834 - 5145 (+)
Gene ID: HRGMv2_0547_6_3
Type: TC
Location: 5171 - 7270 (+)
Type: TC
Location: 5171 - 7270 (+)
Gene ID: HRGMv2_0547_6_4
Type: pfam
Location: 7304 - 8584 (+)
Type: pfam
Location: 7304 - 8584 (+)
Gene ID: HRGMv2_0547_6_5
Type: CAZyme
Location: 8823 - 12512 (+)
Type: CAZyme
Location: 8823 - 12512 (+)
Gene ID: HRGMv2_0547_6_6
Type: CAZyme
Location: 12572 - 15790 (+)
Type: CAZyme
Location: 12572 - 15790 (+)
Gene ID: HRGMv2_0547_6_7
Type: pfam
Location: 15812 - 19456 (+)
Type: pfam
Location: 15812 - 19456 (+)
Gene ID: HRGMv2_0547_6_8
Type: CAZyme
Location: 19637 - 21781 (+)
Type: CAZyme
Location: 19637 - 21781 (+)
Gene ID: HRGMv2_0547_6_9
Type: CAZyme
Location: 21786 - 23780 (+)
Type: CAZyme
Location: 21786 - 23780 (+)
Gene ID: HRGMv2_0547_6_10
Type: CAZyme
Location: 24136 - 25602 (-)
Type: CAZyme
Location: 24136 - 25602 (-)
Gene ID: HRGMv2_0547_6_11
Type: CAZyme
Location: 25683 - 28277 (-)
Type: CAZyme
Location: 25683 - 28277 (-)
Gene ID: HRGMv2_0547_6_12
Type: pfam
Location: 28605 - 30089 (+)
Type: pfam
Location: 28605 - 30089 (+)
Gene ID: HRGMv2_0547_6_13
Type: pfam
Location: 30144 - 31460 (+)
Type: pfam
Location: 30144 - 31460 (+)
Gene ID: HRGMv2_0547_6_14
Type: TC
Location: 31572 - 33047 (+)
Type: TC
Location: 31572 - 33047 (+)
Gene ID: HRGMv2_0547_6_15
Type: CAZyme
Location: 33269 - 37420 (+)
Type: CAZyme
Location: 33269 - 37420 (+)
Gene ID: HRGMv2_0547_6_16
Type: CAZyme
Location: 37603 - 39726 (+)
Type: CAZyme
Location: 37603 - 39726 (+)
Gene ID: HRGMv2_0547_6_17
Type: pfam
Location: 39924 - 41378 (+)
Type: pfam
Location: 39924 - 41378 (+)
Gene ID: HRGMv2_0547_6_18
Type: CAZyme
Location: 41825 - 44404 (+)
Type: CAZyme
Location: 41825 - 44404 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp019415705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.