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Cluster: HRGMv2_0547_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0547_49 HRGMv2_0547_49_5 5375 6379 - GT2
TC HRGMv2_0547_49 HRGMv2_0547_49_6 6411 8129 - 4.C.1.1.7
pfam HRGMv2_0547_49 HRGMv2_0547_49_7 8255 8836 - ADK | AAA_17
STP HRGMv2_0547_49 HRGMv2_0547_49_8 8899 9438 - Pribosyltran
TC HRGMv2_0547_49 HRGMv2_0547_49_9 9576 10778 - 2.A.1.46.5
pfam HRGMv2_0547_49 HRGMv2_0547_49_10 10866 11306 - Hexapep
CAZyme HRGMv2_0547_49 HRGMv2_0547_49_11 11500 12498 + CE4
CAZyme HRGMv2_0547_49 HRGMv2_0547_49_12 12527 14236 + CE20
Gene ID: HRGMv2_0547_49_5
Type: CAZyme
Location: 5375 - 6379 (-)
Gene ID: HRGMv2_0547_49_6
Type: TC
Location: 6411 - 8129 (-)
Gene ID: HRGMv2_0547_49_7
Type: pfam
Location: 8255 - 8836 (-)
Gene ID: HRGMv2_0547_49_8
Type: STP
Location: 8899 - 9438 (-)
Gene ID: HRGMv2_0547_49_9
Type: TC
Location: 9576 - 10778 (-)
Gene ID: HRGMv2_0547_49_10
Type: pfam
Location: 10866 - 11306 (-)
Gene ID: HRGMv2_0547_49_11
Type: CAZyme
Location: 11500 - 12498 (+)
Gene ID: HRGMv2_0547_49_12
Type: CAZyme
Location: 12527 - 14236 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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