Cluster: HRGMv2_0547_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_0547
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0547_33 | HRGMv2_0547_33_11 | 10146 | 13199 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0547_33 | HRGMv2_0547_33_12 | 13212 | 14774 | + | SusD_RagB | SusD-like_3 |
| CAZyme | HRGMv2_0547_33 | HRGMv2_0547_33_13 | 14794 | 16425 | + | CE1 |
| CAZyme | HRGMv2_0547_33 | HRGMv2_0547_33_14 | 16422 | 17306 | + | CE1 |
| CAZyme | HRGMv2_0547_33 | HRGMv2_0547_33_15 | 17362 | 18552 | + | CE1 |
| CAZyme | HRGMv2_0547_33 | HRGMv2_0547_33_16 | 18552 | 19472 | + | GH3 |
Gene ID: HRGMv2_0547_33_11
Type: TC
Location: 10146 - 13199 (+)
Type: TC
Location: 10146 - 13199 (+)
Gene ID: HRGMv2_0547_33_12
Type: pfam
Location: 13212 - 14774 (+)
Type: pfam
Location: 13212 - 14774 (+)
Gene ID: HRGMv2_0547_33_13
Type: CAZyme
Location: 14794 - 16425 (+)
Type: CAZyme
Location: 14794 - 16425 (+)
Gene ID: HRGMv2_0547_33_14
Type: CAZyme
Location: 16422 - 17306 (+)
Type: CAZyme
Location: 16422 - 17306 (+)
Gene ID: HRGMv2_0547_33_15
Type: CAZyme
Location: 17362 - 18552 (+)
Type: CAZyme
Location: 17362 - 18552 (+)
Gene ID: HRGMv2_0547_33_16
Type: CAZyme
Location: 18552 - 19472 (+)
Type: CAZyme
Location: 18552 - 19472 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp019415705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.