Cluster: HRGMv2_0547_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0547
- CGC Family ID: CGCFAM_00095
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0547_5 | HRGMv2_0547_5_1 | 393 | 2738 | - | GH133 |
| TF | HRGMv2_0547_5 | HRGMv2_0547_5_2 | 3389 | 7453 | - | HTH_AraC |
| CAZyme | HRGMv2_0547_5 | HRGMv2_0547_5_3 | 7668 | 8885 | + | GH88 |
| TC | HRGMv2_0547_5 | HRGMv2_0547_5_4 | 8910 | 12050 | + | 1.B.14.6.1 |
| TC | HRGMv2_0547_5 | HRGMv2_0547_5_5 | 12068 | 13663 | + | 8.A.46.1.3 |
| pfam | HRGMv2_0547_5 | HRGMv2_0547_5_6 | 13663 | 14640 | + | DUF5017 |
| CAZyme | HRGMv2_0547_5 | HRGMv2_0547_5_7 | 14637 | 16220 | + | PL29 |
Gene ID: HRGMv2_0547_5_1
Type: CAZyme
Location: 393 - 2738 (-)
Type: CAZyme
Location: 393 - 2738 (-)
Gene ID: HRGMv2_0547_5_2
Type: TF
Location: 3389 - 7453 (-)
Type: TF
Location: 3389 - 7453 (-)
Gene ID: HRGMv2_0547_5_3
Type: CAZyme
Location: 7668 - 8885 (+)
Type: CAZyme
Location: 7668 - 8885 (+)
Gene ID: HRGMv2_0547_5_4
Type: TC
Location: 8910 - 12050 (+)
Type: TC
Location: 8910 - 12050 (+)
Gene ID: HRGMv2_0547_5_5
Type: TC
Location: 12068 - 13663 (+)
Type: TC
Location: 12068 - 13663 (+)
Gene ID: HRGMv2_0547_5_6
Type: pfam
Location: 13663 - 14640 (+)
Type: pfam
Location: 13663 - 14640 (+)
Gene ID: HRGMv2_0547_5_7
Type: CAZyme
Location: 14637 - 16220 (+)
Type: CAZyme
Location: 14637 - 16220 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp019415705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.