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Cluster: HRGMv2_0534_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0534_4 HRGMv2_0534_4_22 26699 27832 + GT2
pfam HRGMv2_0534_4 HRGMv2_0534_4_23 27927 28931 + Acyl_transf_3
TC HRGMv2_0534_4 HRGMv2_0534_4_24 29004 29705 + 1.B.44.1.2
pfam HRGMv2_0534_4 HRGMv2_0534_4_25 29726 30700 + PorP_SprF
TC HRGMv2_0534_4 HRGMv2_0534_4_26 30704 32149 + 9.A.25.1.1
TC HRGMv2_0534_4 HRGMv2_0534_4_27 32198 33169 + 9.A.25.1.1
TC HRGMv2_0534_4 HRGMv2_0534_4_28 33176 34747 + 9.A.25.1.1
Gene ID: HRGMv2_0534_4_22
Type: CAZyme
Location: 26699 - 27832 (+)
Gene ID: HRGMv2_0534_4_23
Type: pfam
Location: 27927 - 28931 (+)
Gene ID: HRGMv2_0534_4_24
Type: TC
Location: 29004 - 29705 (+)
Gene ID: HRGMv2_0534_4_25
Type: pfam
Location: 29726 - 30700 (+)
Gene ID: HRGMv2_0534_4_26
Type: TC
Location: 30704 - 32149 (+)
Gene ID: HRGMv2_0534_4_27
Type: TC
Location: 32198 - 33169 (+)
Gene ID: HRGMv2_0534_4_28
Type: TC
Location: 33176 - 34747 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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