Cluster: HRGMv2_0534_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0534
- CGC Family ID: CGCFAM_09575
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0534_2 | HRGMv2_0534_2_53 | 55783 | 58254 | - | 3.A.11.3.1 |
| CAZyme | HRGMv2_0534_2 | HRGMv2_0534_2_54 | 58262 | 59491 | - | GT4 |
| pfam | HRGMv2_0534_2 | HRGMv2_0534_2_55 | 60025 | 61680 | - | Fumerase | Fumerase_C |
| pfam | HRGMv2_0534_2 | HRGMv2_0534_2_56 | 61810 | 62502 | - | PseudoU_synth_2 |
| TC | HRGMv2_0534_2 | HRGMv2_0534_2_57 | 63074 | 66430 | + | 1.B.14.6.2 |
Gene ID: HRGMv2_0534_2_53
Type: TC
Location: 55783 - 58254 (-)
Type: TC
Location: 55783 - 58254 (-)
Gene ID: HRGMv2_0534_2_54
Type: CAZyme
Location: 58262 - 59491 (-)
Type: CAZyme
Location: 58262 - 59491 (-)
Gene ID: HRGMv2_0534_2_55
Type: pfam
Location: 60025 - 61680 (-)
Type: pfam
Location: 60025 - 61680 (-)
Gene ID: HRGMv2_0534_2_56
Type: pfam
Location: 61810 - 62502 (-)
Type: pfam
Location: 61810 - 62502 (-)
Gene ID: HRGMv2_0534_2_57
Type: TC
Location: 63074 - 66430 (+)
Type: TC
Location: 63074 - 66430 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Sodaliphilus
Species
Sodaliphilus sp947254205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.